Sro156_g070600.1 (Contig473.g6398)


Aliases : Contig473.g6398

Description : NSFL1 cofactor p47


Gene families : OG_01_0002172 (OrthoFinder) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro156_g070600.1
Cluster HCCA: Cluster_141


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001012 UBX_dom 175 240
IPR012989 SEP_domain 75 142
No external refs found!