Sro1567_g282990.1 (Contig3738.g28665)

Aliases : Contig3738.g28665

Description : Leptomycin B resistance protein pmd1

Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1567_g282990.1
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000711.45	tig00000711_g3408.t1	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder
Cre17.g725200	30782751	ABC transporter B family member 12 OS=Arabidopsis thaliana	0.01	OrthoFinder
PTI_03G01030.1	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.02	OrthoFinder
TP05G00300.1	No alias	ABC transporter-like; ABC transporter type 1,...	0.02	OrthoFinder
lcl\|LHPG02000003.1_cds_PRW60050.1_6327	PRW60050	ATP-binding cassette sub-family B member 9	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Enrichment
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	Enrichment
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Enrichment
MF	GO:0019888	protein phosphatase regulator activity	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment
CC	GO:1902494	catalytic complex	IEP	Enrichment
CC	GO:1903293	phosphatase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	923	1185
IPR011527	ABC1_TM_dom	107	357
IPR003439	ABC_transporter-like_ATP-bd	1275	1447
IPR003439	ABC_transporter-like_ATP-bd	587	733

External Links

No external refs found!

Sro1567_g282990.1 (Contig3738.g28665)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation