Sro14_g010590.1 (Contig1128.g10808)


Aliases : Contig1128.g10808

Description : U4 u6 small nuclear ribonucleoprotein


Gene families : OG_01_0003148 (OrthoFinder) Phylogenetic Tree(s): OG0003148_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro14_g010590.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Vocar.0039s0071.1 32897760 WD40 repeat; Pre-mRNA processing factor 4 (PRP4)-like... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
InterPro domains Description Start Stop
IPR014906 PRP4-like 47 73
IPR001680 WD40_repeat 495 547
IPR001680 WD40_repeat 402 440
IPR001680 WD40_repeat 453 490
IPR001680 WD40_repeat 309 345
IPR001680 WD40_repeat 365 397
No external refs found!