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  5. Sro1485_g276510.1

Sro1485_g276510.1 (Contig4245.g32132)


Aliases : Contig4245.g32132

Description : Putative white-brown complex homolog protein 30


Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sro1485_g276510.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020685.31 tig00020685_g12947.t1 ABC transporter G family member 22 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021234.5 tig00021234_g19379.t1 ABC transporter G family member 12 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021537.71 tig00021537_g22322.t1 ABC transporter G family member 27 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre03.g169300 30787423 ABC transporter G family member 13 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre12.g527100 30793034 ABC transporter G family member 28 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre17.g717050 30782048 ABC transporter G family member 21 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz03g15170.t1 No alias ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
Sro604_g174070.1 Contig2463.g20161 Putative white-brown complex homolog protein 30 0.05 OrthoFinder
TP14G03100.1 No alias ABC transporter-like; ABC-2 type transporter [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54121 54121 ABC-2 type transporter; ABC transporter-like [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001387.1_cds_GFH18975.1_13452 HaLaN_15859, GFH18975 ABC transporter domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002242.1_cds_GFH23307.1_17784 HaLaN_20902, GFH23307 ATP-binding cassette sub-family G member 1 0.03 OrthoFinder
lcl|BLLF01003509.1_cds_GFH27525.1_22002 HaLaN_25859, GFH27525 ABC transporter domain-containing protein 0.01 OrthoFinder
lcl|BLLF01008383.1_cds_GFH33351.1_27828 HaLaN_32709, GFH33351 ABC transporter domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498384.1_7337 KAA8498384 ABC transporter G family member 22 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 437 643
IPR003439 ABC_transporter-like_ATP-bd 103 244
No external refs found!