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  5. Sro142_g066040.1

Sro142_g066040.1 (Contig226.g2653)


Aliases : Contig226.g2653

Description : DNA polymerase IV


Gene families : OG_01_0001692 (OrthoFinder) Phylogenetic Tree(s): OG0001692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro142_g066040.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Cre12.g550800 30792667, REV1 DNA damage response.DNA repair polymerase activities.DNA... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56206.1_10068 PRW56206 DNA repair REV1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
InterPro domains Description Start Stop
IPR001357 BRCT_dom 356 432
IPR017961 DNA_pol_Y-fam_little_finger 860 987
IPR001126 UmuC 609 776
No external refs found!