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  5. Sro1418_g271020.1

Sro1418_g271020.1 (Contig4752.g35218)


Aliases : Contig4752.g35218

Description : Receptor ionotropic, NMDA 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1418_g271020.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Sro1106_g241960.1 Contig673.g7891 Receptor ionotropic, NMDA 1 0.04 OrthoFinder
Sro1106_g241980.1 Contig673.g7893 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro1333_g263630.1 Contig3364.g26362 Receptor subunit 1 0.06 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro2104_g314720.1 Contig873.g9427 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro2288_g322060.1 Contig4716.g35057 Hypothetical protein 0.05 OrthoFinder
Sro2900_g339760.1 Contig1521.g13881 Receptor subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001733 galactosylceramide sulfotransferase activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
CC GO:0005794 Golgi apparatus IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0050694 galactose 3-O-sulfotransferase activity IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 198 495
No external refs found!