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  5. Sro139_g065120.1

Sro139_g065120.1 (Contig4334.g32688)


Aliases : Contig4334.g32688

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro139_g065120.1
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
PTI_01G02050.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro946_g223260.1 Contig2147.g18086 Helicase 0.04 OrthoFinder
TP02G10060.1 No alias Helicase-associated [Interproscan]. 0.01 OrthoFinder
TP18G01930.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 529 592
IPR005114 Helicase_assoc 454 517
IPR005114 Helicase_assoc 750 813
IPR005114 Helicase_assoc 165 225
IPR005114 Helicase_assoc 11 70
No external refs found!