1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1355_g265560.1

Sro1355_g265560.1 (Contig1703.g15253)


Aliases : Contig1703.g15253

Description : E3 ubiquitin-protein ligase


Gene families : OG_01_0005036 (OrthoFinder) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1355_g265560.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Sro1123_g243700.1 Contig3394.g26544 Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 182 226
No external refs found!