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  5. Sro1273_g258300.1

Sro1273_g258300.1 (Contig3385.g26473)


Aliases : Contig3385.g26473

Description : Polymorphic outer membrane protein


Gene families : OG_01_0002160 (OrthoFinder) Phylogenetic Tree(s): OG0002160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1273_g258300.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Sro234_g094350.1 Contig3223.g25482 Hypothetical protein 0.04 OrthoFinder
Sro234_g094360.1 Contig3223.g25483 Hypothetical protein 0.04 OrthoFinder
Sro2441_g327750.1 Contig4619.g34460 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!