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Aliases : tig00000215_g18601.t1
No description available
Gene families : OG_01_0003020 (OrthoFinder) Phylogenetic Tree(s): OG0003020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000215.63 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz04g18060.t1 | No alias | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD16571 | No alias | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_08G02630.1 | No alias | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1389_g268530.1 | Contig3774.g28973 | 39S ribosomal protein L43, mitochondrial | 0.04 | OrthoFinder | |
| Transcript_contig_59990 | 59990 | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002500982.1 | MICPUN_80305, 80305 | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_003063004.1 | MicpuC2_52669, 52669 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01005642.1_cds_GFH31454.1_25931 | HaLaN_30510, GFH31454 | Ribosomal protein/NADH dehydrogenase domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33640.1_3236 | PRW33640 | 54S ribosomal mitochondrial | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000221 | vacuolar proton-transporting V-type ATPase, V1 domain | IEP | Enrichment |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Enrichment |
| MF | GO:0004864 | protein phosphatase inhibitor activity | IEP | Enrichment |
| MF | GO:0004865 | protein serine/threonine phosphatase inhibitor activity | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| BP | GO:0006480 | N-terminal protein amino acid methylation | IEP | Enrichment |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006788 | heme oxidation | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0019208 | phosphatase regulator activity | IEP | Enrichment |
| MF | GO:0019212 | phosphatase inhibitor activity | IEP | Enrichment |
| MF | GO:0019829 | ATPase-coupled cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0019888 | protein phosphatase regulator activity | IEP | Enrichment |
| BP | GO:0031365 | N-terminal protein amino acid modification | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| CC | GO:0033180 | proton-transporting V-type ATPase, V1 domain | IEP | Enrichment |
| BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
| BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Enrichment |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007741 | Ribosome/NADH_DH | 27 | 93 |
| No external refs found! |