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  5. Sro122_g059330.1

Sro122_g059330.1 (Contig71.g752)


Aliases : Contig71.g752

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro122_g059330.1
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Sro1710_g292770.1 Contig1549.g14083 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro193_g082580.1 Contig826.g9157 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder
Sro1945_g306950.1 Contig3128.g24828 Putative fatty-acid--CoA ligase FadD21 0.03 OrthoFinder
Sro329_g118780.1 Contig2017.g17248 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro613_g175660.1 Contig1327.g12256 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 12 435
No external refs found!