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  5. Sro1175_g249230.1

Sro1175_g249230.1 (Contig1328.g12270)


Aliases : Contig1328.g12270

Description : Hypothetical protein


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1175_g249230.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Sro1040_g234440.1 Contig3118.g24782 Amino acid adenylation 0.03 OrthoFinder
Sro1753_g295420.1 Contig4414.g33155 D-alanine--D-alanyl carrier protein ligase 0.05 OrthoFinder
Sro3579_g349300.1 Contig1649.g14866 Putative fatty-acid--CoA ligase FadD21 0.04 OrthoFinder
Sro4161_g353230.1 Contig1186.g11242 Putative fatty-acid--CoA ligase FadD21 0.03 OrthoFinder
Sro653_g181920.1 Contig4252.g32184 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!