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  5. Sro1123_g243700.1

Sro1123_g243700.1 (Contig3394.g26544)


Aliases : Contig3394.g26544

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0005036 (OrthoFinder) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1123_g243700.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Sro1355_g265560.1 Contig1703.g15253 E3 ubiquitin-protein ligase 0.04 OrthoFinder
Sro532_g161420.1 Contig1529.g13893 Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 172
No external refs found!