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  5. Sro1106_g241980.1

Sro1106_g241980.1 (Contig673.g7893)


Aliases : Contig673.g7893

Description : Receptor ionotropic, NMDA 1


Gene families : OG_01_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1106_g241980.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Sro1418_g271020.1 Contig4752.g35218 Receptor ionotropic, NMDA 1 0.03 OrthoFinder
Sro1777_g296910.1 Contig3318.g26032 Receptor subunit 1 0.03 OrthoFinder
Sro1777_g296940.1 Contig3318.g26035 Receptor ionotropic, NMDA 1 0.06 OrthoFinder
Sro1834_g300540.1 Contig890.g9473 Receptor subunit 1 0.03 OrthoFinder
Sro206_g086490.1 Contig4750.g35186 Ionotropic glutamate receptor [Interproscan]. 0.05 OrthoFinder
Sro217_g089690.1 Contig1718.g15343 NMDA receptor subtype of glutamate-gated ion channels... 0.04 OrthoFinder
Sro224_g091510.1 Contig758.g8605 Receptor subunit 1 0.03 OrthoFinder
Sro468_g149240.1 Contig3973.g30518 Receptor subunit 1 0.03 OrthoFinder
Sro468_g149250.1 Contig3973.g30519 Hypothetical protein 0.06 OrthoFinder
Sro557_g166130.1 Contig1427.g13183 Receptor subunit 1 0.04 OrthoFinder
Sro62_g035330.1 Contig2718.g21914 Ionotropic glutamate receptor [Interproscan]. 0.08 OrthoFinder
Sro87_g045920.1 Contig2014.g17200 Receptor ionotropic, NMDA 1 0.05 OrthoFinder
Sro935_g222040.1 Contig1126.g10784 Receptor subunit 1 0.03 OrthoFinder
Sro990_g228610.1 Contig427.g5785 Receptor ionotropic, NMDA 1 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 424 506
IPR001638 Solute-binding_3/MltF_N 92 423
No external refs found!