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  5. Sro1013_g231340.1

Sro1013_g231340.1 (Contig3614.g27943)


Aliases : Contig3614.g27943

Description : Pick C1-like protein 1


Gene families : OG_01_0000125 (OrthoFinder) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1013_g231340.1
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
OT_14G03100.1 No alias Protein patched/dispatched [Interproscan]. 0.01 OrthoFinder
Sro2359_g324710.1 Contig777.g8723 Pick C1-like protein 1 0.03 OrthoFinder
Sro62_g035280.1 Contig2718.g21909 Pick C1-like protein 1 0.02 OrthoFinder
Sro62_g035310.1 Contig2718.g21912 Pick C1-like protein 1 0.03 OrthoFinder
Sro78_g042390.1 Contig1698.g15215 Pick C1-like protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003392 Ptc/Disp 275 874
No external refs found!