Aliases : KAA8490214
Description : Hypothetical protein
Gene families : OG_01_0000233 (OrthoFinder) Phylogenetic Tree(s): OG0000233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000046.1_cds_KAA8490214.1_5699 | |
Cluster | HCCA: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8499399.1_8352 | KAA8499399 | Reverse transcriptase domain [Interproscan]. | 0.09 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496272.1_1 | KAA8496272 | Retrotransposable element | 0.09 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497467.1_1196 | KAA8497467 | Hypothetical protein | 0.12 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496269.1_2267 | KAA8496269 | Retrotransposable element | 0.08 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496271.1_2269 | KAA8496271 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494359.1_2889 | KAA8494359 | Retrovirus-related Pol polyprotein from type-1... | 0.06 | OrthoFinder | |
lcl|VRMN01000005.1_cds_KAA8494358.1_4222 | KAA8494358 | Retrotransposable element | 0.05 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493457.1_9758 | KAA8493457 | Hypothetical protein | 0.03 | OrthoFinder | |
lcl|VRMN01000009.1_cds_KAA8492708.1_9401 | KAA8492708 | Copia protein | 0.04 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490705.1_5961 | KAA8490705 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490574.1_6047 | KAA8490574 | RNA-directed DNA polymerase from mobile element jockey | 0.1 | OrthoFinder | |
lcl|VRMN01000029.1_cds_KAA8490409.1_6098 | KAA8490409 | Reverse transcriptase domain [Interproscan]. | 0.15 | OrthoFinder | |
lcl|VRMN01000032.1_cds_KAA8490339.1_5681 | KAA8490339 | Retrotransposable element | 0.06 | OrthoFinder | |
lcl|VRMN01000034.1_cds_KAA8490314.1_2442 | KAA8490314 | Retrotransposable element | 0.04 | OrthoFinder | |
lcl|VRMN01000040.1_cds_KAA8490248.1_2447 | KAA8490248 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000041.1_cds_KAA8490243.1_5207 | KAA8490243 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490235.1_6102 | KAA8490235 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490239.1_6106 | KAA8490239 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000043.1_cds_KAA8490232.1_2422 | KAA8490232 | Retrotransposable element | 0.05 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490227.1_6079 | KAA8490227 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490228.1_6080 | KAA8490228 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490222.1_4686 | KAA8490222 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490223.1_4687 | KAA8490223 | RNA-directed DNA polymerase from mobile element jockey | 0.07 | OrthoFinder | |
lcl|VRMN01000047.1_cds_KAA8490211.1_4224 | KAA8490211 | Retrotransposable element | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0015074 | DNA integration | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |