Aliases : KAA8490243
Description : Hypothetical protein
Gene families : OG_01_0000233 (OrthoFinder) Phylogenetic Tree(s): OG0000233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000041.1_cds_KAA8490243.1_5207 | |
Cluster | HCCA: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8499398.1_8351 | KAA8499398 | Retrotransposable element | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499399.1_8352 | KAA8499399 | Reverse transcriptase domain [Interproscan]. | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499403.1_8356 | KAA8499403 | Reverse transcriptase domain [Interproscan]. | 0.06 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496275.1_4 | KAA8496275 | Retrotransposable element | 0.05 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497468.1_1197 | KAA8497468 | Reverse transcriptase domain [Interproscan]. | 0.04 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496268.1_2266 | KAA8496268 | Hypothetical protein | 0.1 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496269.1_2267 | KAA8496269 | Retrotransposable element | 0.05 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494359.1_2889 | KAA8494359 | Retrovirus-related Pol polyprotein from type-1... | 0.12 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494360.1_2890 | KAA8494360 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000005.1_cds_KAA8494358.1_4222 | KAA8494358 | Retrotransposable element | 0.14 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492026.1_5209 | KAA8492026 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492295.1_5478 | KAA8492295 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490703.1_5959 | KAA8490703 | Retrotransposable element | 0.07 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490705.1_5961 | KAA8490705 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490572.1_6045 | KAA8490572 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490574.1_6047 | KAA8490574 | RNA-directed DNA polymerase from mobile element jockey | 0.07 | OrthoFinder | |
lcl|VRMN01000028.1_cds_KAA8490413.1_5036 | KAA8490413 | Retrotransposable element | 0.04 | OrthoFinder | |
lcl|VRMN01000029.1_cds_KAA8490408.1_6097 | KAA8490408 | Hypothetical protein | 0.12 | OrthoFinder | |
lcl|VRMN01000032.1_cds_KAA8490336.1_5678 | KAA8490336 | RNA-directed DNA polymerase from mobile element jockey | 0.06 | OrthoFinder | |
lcl|VRMN01000032.1_cds_KAA8490339.1_5681 | KAA8490339 | Retrotransposable element | 0.12 | OrthoFinder | |
lcl|VRMN01000034.1_cds_KAA8490314.1_2442 | KAA8490314 | Retrotransposable element | 0.07 | OrthoFinder | |
lcl|VRMN01000038.1_cds_KAA8490257.1_2416 | KAA8490257 | Reverse transcriptase domain [Interproscan]. | 0.04 | OrthoFinder | |
lcl|VRMN01000038.1_cds_KAA8490258.1_2417 | KAA8490258 | Hypothetical protein | 0.1 | OrthoFinder | |
lcl|VRMN01000038.1_cds_KAA8490261.1_2420 | KAA8490261 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000040.1_cds_KAA8490248.1_2447 | KAA8490248 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490237.1_6104 | KAA8490237 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490239.1_6106 | KAA8490239 | Hypothetical protein | 0.08 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490227.1_6079 | KAA8490227 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490228.1_6080 | KAA8490228 | Hypothetical protein | 0.07 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490219.1_4683 | KAA8490219 | Reverse transcriptase domain [Interproscan]. | 0.04 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490222.1_4686 | KAA8490222 | Hypothetical protein | 0.13 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490223.1_4687 | KAA8490223 | RNA-directed DNA polymerase from mobile element jockey | 0.08 | OrthoFinder | |
lcl|VRMN01000046.1_cds_KAA8490213.1_5698 | KAA8490213 | Retrotransposable element | 0.09 | OrthoFinder | |
lcl|VRMN01000046.1_cds_KAA8490214.1_5699 | KAA8490214 | Hypothetical protein | 0.04 | OrthoFinder | |
lcl|VRMN01000047.1_cds_KAA8490211.1_4224 | KAA8490211 | Retrotransposable element | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |