1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000036.1_cds_KAA8490271.1_5941

lcl|VRMN01000036.1_cds_KAA8490271.1_5941 (KAA8490271)


Aliases : KAA8490271

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94


Gene families : OG_01_0000420 (OrthoFinder) Phylogenetic Tree(s): OG0000420_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000036.1_cds_KAA8490271.1_5941

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497529.1_6482 KAA8497529 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498171.1_7124 KAA8498171 Copia protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498455.1_7408 KAA8498455 gag-polyprotein putative aspartyl protease;... 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494477.1_3007 KAA8494477 Copia protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493355.1_9656 KAA8493355 Copia protein 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492969.1_2705 KAA8492969 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.02 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491237.1_5865 KAA8491237 Copia protein 0.02 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491238.1_5866 KAA8491238 Integrase, catalytic core; Zinc finger, CCHC-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491248.1_5876 KAA8491248 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490364.1_5754 KAA8490364 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 229 373
No external refs found!