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  5. lcl|VRMN01000034.1_cds_KAA8490308.1_2436

lcl|VRMN01000034.1_cds_KAA8490308.1_2436 (KAA8490308)


Aliases : KAA8490308

Description : Transposon Ty4-J Gag-Pol polyprotein


Gene families : OG_01_0001103 (OrthoFinder) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000034.1_cds_KAA8490308.1_2436
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000016.1_cds_KAA8491013.1_9770 KAA8491013 Hypothetical protein 0.06 OrthoFinder
lcl|VRMN01000021.1_cds_KAA8490613.1_5712 KAA8490613 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 554 766
No external refs found!