Aliases : KAA8490337
Description : Hypothetical protein
Gene families : OG_01_0000233 (OrthoFinder) Phylogenetic Tree(s): OG0000233_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000032.1_cds_KAA8490337.1_5679 | |
Cluster | HCCA: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8499399.1_8352 | KAA8499399 | Reverse transcriptase domain [Interproscan]. | 0.07 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8496272.1_1 | KAA8496272 | Retrotransposable element | 0.07 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497467.1_1196 | KAA8497467 | Hypothetical protein | 0.09 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497468.1_1197 | KAA8497468 | Reverse transcriptase domain [Interproscan]. | 0.05 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496268.1_2266 | KAA8496268 | Hypothetical protein | 0.14 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8496271.1_2269 | KAA8496271 | Hypothetical protein | 0.21 | OrthoFinder | |
lcl|VRMN01000009.1_cds_KAA8492711.1_9404 | KAA8492711 | Retrotransposable element | 0.1 | OrthoFinder | |
lcl|VRMN01000010.1_cds_KAA8492026.1_5209 | KAA8492026 | Hypothetical protein | 0.05 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490703.1_5959 | KAA8490703 | Retrotransposable element | 0.1 | OrthoFinder | |
lcl|VRMN01000019.1_cds_KAA8490705.1_5961 | KAA8490705 | Hypothetical protein | 0.05 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490574.1_6047 | KAA8490574 | RNA-directed DNA polymerase from mobile element jockey | 0.09 | OrthoFinder | |
lcl|VRMN01000028.1_cds_KAA8490413.1_5036 | KAA8490413 | Retrotransposable element | 0.05 | OrthoFinder | |
lcl|VRMN01000029.1_cds_KAA8490408.1_6097 | KAA8490408 | Hypothetical protein | 0.11 | OrthoFinder | |
lcl|VRMN01000029.1_cds_KAA8490409.1_6098 | KAA8490409 | Reverse transcriptase domain [Interproscan]. | 0.12 | OrthoFinder | |
lcl|VRMN01000032.1_cds_KAA8490339.1_5681 | KAA8490339 | Retrotransposable element | 0.22 | OrthoFinder | |
lcl|VRMN01000034.1_cds_KAA8490314.1_2442 | KAA8490314 | Retrotransposable element | 0.09 | OrthoFinder | |
lcl|VRMN01000038.1_cds_KAA8490257.1_2416 | KAA8490257 | Reverse transcriptase domain [Interproscan]. | 0.27 | OrthoFinder | |
lcl|VRMN01000040.1_cds_KAA8490248.1_2447 | KAA8490248 | Hypothetical protein | 0.09 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490235.1_6102 | KAA8490235 | Hypothetical protein | 0.13 | OrthoFinder | |
lcl|VRMN01000043.1_cds_KAA8490234.1_2424 | KAA8490234 | Hypothetical protein | 0.1 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490227.1_6079 | KAA8490227 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000044.1_cds_KAA8490228.1_6080 | KAA8490228 | Hypothetical protein | 0.09 | OrthoFinder | |
lcl|VRMN01000045.1_cds_KAA8490223.1_4687 | KAA8490223 | RNA-directed DNA polymerase from mobile element jockey | 0.12 | OrthoFinder | |
lcl|VRMN01000047.1_cds_KAA8490210.1_4223 | KAA8490210 | Hypothetical protein | 0.06 | OrthoFinder | |
lcl|VRMN01000047.1_cds_KAA8490211.1_4224 | KAA8490211 | Retrotransposable element | 0.06 | OrthoFinder | |
lcl|VRMN01000049.1_cds_KAA8490206.1_5939 | KAA8490206 | Hypothetical protein | 0.1 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0015074 | DNA integration | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |