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  5. lcl|VRMN01000031.1_cds_KAA8490355.1_5745

lcl|VRMN01000031.1_cds_KAA8490355.1_5745 (KAA8490355)


Aliases : KAA8490355

Description : 40S ribosomal protein S26-B


Gene families : OG_01_0002849 (OrthoFinder) Phylogenetic Tree(s): OG0002849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000031.1_cds_KAA8490355.1_5745
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.9 tig00001486_g8926.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder
Cre16.g682300 30776938, RPS26 Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 OrthoFinder
Cz08g12070.t1 No alias Ribosomal protein S26e [Interproscan]. 0.16 OrthoFinder
Dusal.0032s00020.1 33186664 Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
EOD22215 No alias Ribosomal protein S26e [Interproscan]. 0.09 OrthoFinder
OT_02G02540.1 No alias Ribosomal protein S26e [Interproscan]. 0.07 OrthoFinder
PTI_21G00830.1 No alias Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
Sro1334_g263860.1 Contig785.g8790 40S ribosomal protein S26 0.18 OrthoFinder
SymbC1.scaffold913.4 913.4 Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
Vocar.0018s0140.1 32898717 Ribosomal protein S26e [Interproscan]. 0.06 OrthoFinder
XM_002504425.1 MICPUN_61082, 61082 Ribosomal protein S26e [Interproscan]. 0.14 OrthoFinder
XM_003059864.1 MicpuC2_27736, 27736 Ribosomal protein S26e [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01001764.1_cds_GFH21111.1_15588 HaLaN_18351, GFH21111 40S ribosomal protein S26 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 99
No external refs found!