Aliases : KAA8490418
Description : Transposon Ty3-G Gag-Pol polyprotein
Gene families : OG_01_0000071 (OrthoFinder) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000028.1_cds_KAA8490418.1_5041 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|VRMN01000001.1_cds_KAA8497479.1_6432 | KAA8497479 | Transposon Ty3-G Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497578.1_6531 | KAA8497578 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497670.1_6623 | KAA8497670 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498184.1_7137 | KAA8498184 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498457.1_7410 | KAA8498457 | Transposon Ty3-I Gag-Pol polyprotein | 0.11 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498878.1_7831 | KAA8498878 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498879.1_7832 | KAA8498879 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499404.1_8357 | KAA8499404 | Transposon Ty3-I Gag-Pol polyprotein | 0.03 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499405.1_8358 | KAA8499405 | Retrotransposon-derived protein PEG10 | 0.13 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499909.1_8862 | KAA8499909 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497004.1_733 | KAA8497004 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495211.1_1209 | KAA8495211 | Transposon Ty3-I Gag-Pol polyprotein | 0.09 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495213.1_1211 | KAA8495213 | Transposon Ty3-I Gag-Pol polyprotein | 0.02 | OrthoFinder | |
lcl|VRMN01000003.1_cds_KAA8495820.1_1818 | KAA8495820 | Transposon Ty3-I Gag-Pol polyprotein | 0.07 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494624.1_3154 | KAA8494624 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494670.1_3200 | KAA8494670 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494765.1_3295 | KAA8494765 | Transposon Ty3-I Gag-Pol polyprotein | 0.14 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493487.1_4249 | KAA8493487 | Transposon Ty3-I Gag-Pol polyprotein | 0.11 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493809.1_4571 | KAA8493809 | Transposon Ty3-I Gag-Pol polyprotein | 0.04 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493298.1_9599 | KAA8493298 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493461.1_9762 | KAA8493461 | Transposon Ty3-I Gag-Pol polyprotein | 0.09 | OrthoFinder | |
lcl|VRMN01000008.1_cds_KAA8493085.1_2821 | KAA8493085 | Transposon Ty3-I Gag-Pol polyprotein | 0.06 | OrthoFinder | |
lcl|VRMN01000011.1_cds_KAA8491827.1_4835 | KAA8491827 | Transposon Ty3-I Gag-Pol polyprotein | 0.03 | OrthoFinder | |
lcl|VRMN01000012.1_cds_KAA8491590.1_5058 | KAA8491590 | Transposon Ty3-I Gag-Pol polyprotein | 0.1 | OrthoFinder | |
lcl|VRMN01000014.1_cds_KAA8491407.1_2408 | KAA8491407 | Transposon Ty3-I Gag-Pol polyprotein | 0.13 | OrthoFinder | |
lcl|VRMN01000017.1_cds_KAA8491004.1_6207 | KAA8491004 | Hypothetical protein | 0.13 | OrthoFinder | |
lcl|VRMN01000018.1_cds_KAA8490791.1_5563 | KAA8490791 | Transposon Ty3-G Gag-Pol polyprotein | 0.1 | OrthoFinder | |
lcl|VRMN01000022.1_cds_KAA8490584.1_6057 | KAA8490584 | Transposon Ty3-I Gag-Pol polyprotein | 0.08 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490460.1_6406 | KAA8490460 | Hypothetical protein | 0.13 | OrthoFinder | |
lcl|VRMN01000026.1_cds_KAA8490464.1_6410 | KAA8490464 | Transposon Ty3-I Gag-Pol polyprotein | 0.05 | OrthoFinder | |
lcl|VRMN01000030.1_cds_KAA8490383.1_3740 | KAA8490383 | Retrovirus-related Pol polyprotein from transposon | 0.05 | OrthoFinder | |
lcl|VRMN01000042.1_cds_KAA8490236.1_6103 | KAA8490236 | Transposon Ty3-G Gag-Pol polyprotein | 0.08 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
BP | GO:0015074 | DNA integration | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |