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  5. lcl|VRMN01000026.1_cds_KAA8490468.1_6414

lcl|VRMN01000026.1_cds_KAA8490468.1_6414 (KAA8490468)


Aliases : KAA8490468

Description : 1-deoxy-D-xylulose 5-phosphate reductoisomerase


Gene families : OG_01_0001587 (OrthoFinder) Phylogenetic Tree(s): OG0001587_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000026.1_cds_KAA8490468.1_6414
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre12.g546050 30793428, DXR1 Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder
OT_04G03300.1 No alias DXP reductoisomerase C-terminal domain;... 0.03 OrthoFinder
PTI_01G10890.1 No alias DXP reductoisomerase C-terminal domain;... 0.04 OrthoFinder
Sro1019_g232030.1 Contig406.g5524 Deoxy-D-xylulose 5-phosphate reductoisomerase 0.02 OrthoFinder
TP18G01880.1 No alias 1-deoxy-D-xylulose 5-phosphate reductoisomerase,... 0.02 OrthoFinder
XM_002504067.1 MICPUN_108708, 108708 1-deoxy-D-xylulose 5-phosphate reductoisomerase,... 0.02 OrthoFinder
XM_003059590.1 MicpuC2_47613, 47613 DXP reductoisomerase C-terminal domain;... 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18292.1_5797 PRW18292 1-deoxy-D-xylulose 5-phosphate reductoisomerase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
MF GO:0070402 NADPH binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR026877 DXPR_C 358 475
IPR013644 DXP_reductoisomerase_C 243 326
IPR013512 DXP_reductoisomerase_N 101 229
No external refs found!