lcl|VRMN01000022.1_cds_KAA8490588.1_6061 (KAA8490588)

Aliases : KAA8490588

Description : Peroxisome biogenesis factor 1

Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000022.1_cds_KAA8490588.1_6061
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
PTI_14G01730.1	No alias	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.02	OrthoFinder
Sro31_g020450.1	Contig420.g5640	Peroxisomal biogenesis factor 6	0.01	OrthoFinder
Vocar.0011s0236.1	32895447	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007031	peroxisome organization	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042579	microbody	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Enrichment
CC	GO:0005739	mitochondrion	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0008173	RNA methyltransferase activity	IEP	Enrichment
MF	GO:0008175	tRNA methyltransferase activity	IEP	Enrichment
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Enrichment
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Enrichment
BP	GO:0015696	ammonium transport	IEP	Enrichment
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	884	1009
IPR003959	ATPase_AAA_core	563	690
IPR041569	AAA_lid_3	1072	1106
IPR015342	PEX-N_psi_beta-barrel	100	180

External Links

No external refs found!