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  5. lcl|VRMN01000021.1_cds_KAA8490613.1_5712

lcl|VRMN01000021.1_cds_KAA8490613.1_5712 (KAA8490613)


Aliases : KAA8490613

Description : Hypothetical protein


Gene families : OG_01_0001103 (OrthoFinder) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000021.1_cds_KAA8490613.1_5712
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8499385.1_8338 KAA8499385 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.11 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494733.1_3263 KAA8494733 Retrovirus-related Pol polyprotein from transposon 0.04 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493479.1_4241 KAA8493479 Hypothetical protein 0.08 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493483.1_4245 KAA8493483 Transposon Ty1-BL Gag-Pol polyprotein 0.08 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493429.1_9730 KAA8493429 Hypothetical protein 0.2 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491013.1_9770 KAA8491013 Hypothetical protein 0.21 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490783.1_6039 KAA8490783 Hypothetical protein 0.07 OrthoFinder
lcl|VRMN01000020.1_cds_KAA8490669.1_4711 KAA8490669 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000021.1_cds_KAA8490614.1_5713 KAA8490614 Hypothetical protein 0.11 OrthoFinder
lcl|VRMN01000021.1_cds_KAA8490624.1_5723 KAA8490624 Transposon Ty1-GR2 Gag-Pol polyprotein 0.18 OrthoFinder
lcl|VRMN01000022.1_cds_KAA8490576.1_6049 KAA8490576 Copia protein 0.08 OrthoFinder
lcl|VRMN01000034.1_cds_KAA8490308.1_2436 KAA8490308 Transposon Ty4-J Gag-Pol polyprotein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!