lcl|VRMN01000018.1_cds_KAA8490794.1_5566 (KAA8490794)

Aliases : KAA8490794

Description : Ribosomal large subunit pseudouridine synthase B

Gene families : OG_01_0000212 (OrthoFinder) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000018.1_cds_KAA8490794.1_5566
Cluster	HCCA: Cluster_67

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	IEA	Interproscan
MF	GO:0009982	pseudouridine synthase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0005216	ion channel activity	IEP	Enrichment
CC	GO:0005892	acetylcholine-gated channel complex	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0015276	ligand-gated ion channel activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022834	ligand-gated channel activity	IEP	Enrichment
CC	GO:0031965	nuclear membrane	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
CC	GO:0034702	ion channel complex	IEP	Enrichment
CC	GO:0043235	receptor complex	IEP	Enrichment
BP	GO:0048878	chemical homeostasis	IEP	Enrichment
BP	GO:0055088	lipid homeostasis	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment
CC	GO:0098802	plasma membrane signaling receptor complex	IEP	Enrichment
CC	GO:1902495	transmembrane transporter complex	IEP	Enrichment
CC	GO:1990351	transporter complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006145	PsdUridine_synth_RsuA/RluA	64	222

External Links

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