1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000017.1_cds_KAA8490987.1_6190

lcl|VRMN01000017.1_cds_KAA8490987.1_6190 (KAA8490987)


Aliases : KAA8490987

Description : Transcription factor hamlet


Gene families : OG_01_0002925 (OrthoFinder) Phylogenetic Tree(s): OG0002925_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000017.1_cds_KAA8490987.1_6190
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000002.1_cds_KAA8497162.1_891 KAA8497162 Zinc finger and BTB domain-containing protein 14 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 471 494
IPR013087 Znf_C2H2_type 442 465
IPR013087 Znf_C2H2_type 413 436
No external refs found!