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  5. lcl|VRMN01000017.1_cds_KAA8490922.1_6125

lcl|VRMN01000017.1_cds_KAA8490922.1_6125 (KAA8490922)


Aliases : KAA8490922

Description : Hypothetical protein


Gene families : OG_01_0002363 (OrthoFinder) Phylogenetic Tree(s): OG0002363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000017.1_cds_KAA8490922.1_6125
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000004.1_cds_KAA8494497.1_3027 KAA8494497 Hypothetical protein 0.19 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494233.1_4097 KAA8494233 Hypothetical protein 0.1 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494234.1_4098 KAA8494234 Hypothetical protein 0.16 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493087.1_2823 KAA8493087 Hypothetical protein 0.19 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491887.1_4895 KAA8491887 Copia protein 0.05 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491414.1_6224 KAA8491414 Transposon Ty2-B Gag-Pol polyprotein 0.09 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491150.1_5778 KAA8491150 Hypothetical protein 0.11 OrthoFinder
lcl|VRMN01000028.1_cds_KAA8490425.1_5048 KAA8490425 Transposon Ty2-B Gag-Pol polyprotein 0.06 OrthoFinder
lcl|VRMN01000032.1_cds_KAA8490340.1_5682 KAA8490340 Hypothetical protein 0.19 OrthoFinder
lcl|VRMN01000035.1_cds_KAA8490294.1_6215 KAA8490294 Transposon Ty2-B Gag-Pol polyprotein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!