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  5. lcl|VRMN01000016.1_cds_KAA8491121.1_9878

lcl|VRMN01000016.1_cds_KAA8491121.1_9878 (KAA8491121)


Aliases : KAA8491121

Description : Putative RING finger protein


Gene families : OG_01_0000569 (OrthoFinder) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000016.1_cds_KAA8491121.1_9878
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_89664 89664 Zinc finger, CHY-type; RCHY1, zinc-ribbon; RING-type... 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57897.1_8353 PRW57897 RING finger and CHY zinc finger domain-containing 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR039512 RCHY1_zinc-ribbon 289 346
IPR001841 Znf_RING 241 283
IPR008913 Znf_CHY 113 185
No external refs found!