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  5. lcl|VRMN01000016.1_cds_KAA8491018.1_9775

lcl|VRMN01000016.1_cds_KAA8491018.1_9775 (KAA8491018)


Aliases : KAA8491018

Description : Protein YnbB


Gene families : OG_01_0004088 (OrthoFinder) Phylogenetic Tree(s): OG0004088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000016.1_cds_KAA8491018.1_9775
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000006.1_cds_KAA8493478.1_4240 KAA8493478 Protein YnbB 0.06 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490804.1_5576 KAA8490804 Protein YnbB 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR009651 Met_g_lyase_put 46 449
No external refs found!