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  5. lcl|VRMN01000014.1_cds_KAA8491321.1_2322

lcl|VRMN01000014.1_cds_KAA8491321.1_2322 (KAA8491321)


Aliases : KAA8491321

Description : Transposable element Tcb2 transposase


Gene families : OG_01_0001874 (OrthoFinder) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000014.1_cds_KAA8491321.1_2322
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497593.1_6546 KAA8497593 Transposable element Tc3 transposase 0.13 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499347.1_8300 KAA8499347 Transposable element Tc3 transposase 0.05 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499365.1_8318 KAA8499365 Transposable element Tc3 transposase 0.15 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499655.1_8608 KAA8499655 Transposable element Tc3 transposase 0.11 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496539.1_268 KAA8496539 Transposable element Tc3 transposase 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495124.1_3654 KAA8495124 Transposable element Tc3 transposase 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493856.1_4618 KAA8493856 Transposable element Tc3 transposase 0.05 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492041.1_5224 KAA8492041 Transposable element Tc3 transposase 0.15 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491309.1_2310 KAA8491309 Transposable element Tc3 transposase 0.06 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490747.1_6003 KAA8490747 Transposable element Tc3 transposase 0.12 OrthoFinder
lcl|VRMN01000023.1_cds_KAA8490543.1_5909 KAA8490543 Transposable element Tc3 transposase 0.04 OrthoFinder
lcl|VRMN01000024.1_cds_KAA8490520.1_4670 KAA8490520 Transposable element Tc3 transposase 0.04 OrthoFinder
lcl|VRMN01000031.1_cds_KAA8490369.1_5759 KAA8490369 Transposable element Tcb2 transposase 0.19 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!