- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : KAA8491490
Description : Fucoxanthin-chlorophyll a-c binding protein, chloroplastic
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000013.1_cds_KAA8491490.1_6300 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD07752 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| EOD08157 | No alias | Light harvesting protein [Ensembl]. | 0.04 | OrthoFinder | |
| EOD18950 | No alias | Light harvesting protein [Ensembl]. | 0.04 | OrthoFinder | |
| EOD24660 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| EOD26056 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
| EOD33861 | No alias | Light harvesting protein [Ensembl]. | 0.05 | OrthoFinder | |
| PTI_02G04020.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_04G04620.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_15G00600.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| PTI_15G00620.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| Sro101_g051590.1 | Contig348.g4712 | Fucoxanthin-chlorophyll a-c binding protein | 0.06 | OrthoFinder | |
| Sro1151_g246800.1 | Contig4710.g35031 | Chloroplastic | 0.06 | OrthoFinder | |
| Sro234_g094380.1 | Contig3223.g25485 | Fucoxanthin-chlorophyll a-c binding protein | 0.06 | OrthoFinder | |
| Sro263_g102180.1 | Contig612.g7540 | Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic | 0.06 | OrthoFinder | |
| Sro453_g146050.1 | Contig1693.g15162 | B binding protein CP29 | 0.06 | OrthoFinder | |
| Sro656_g182410.1 | Contig256.g3152 | Chloroplastic | 0.01 | OrthoFinder | |
| TP05G03540.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| TP09G03710.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| TP18G01450.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0020s0067.1 | 32886585 | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006007 | glucose catabolic process | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0008202 | steroid metabolic process | IEP | Enrichment |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| BP | GO:0015977 | carbon fixation | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| BP | GO:0016125 | sterol metabolic process | IEP | Enrichment |
| BP | GO:0016126 | sterol biosynthetic process | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Enrichment |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0019320 | hexose catabolic process | IEP | Enrichment |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 42 | 187 |
| No external refs found! |