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  5. lcl|VRMN01000013.1_cds_KAA8491463.1_6273

lcl|VRMN01000013.1_cds_KAA8491463.1_6273 (KAA8491463)


Aliases : KAA8491463

Description : Protein RTF2-like


Gene families : OG_01_0001452 (OrthoFinder) Phylogenetic Tree(s): OG0001452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000013.1_cds_KAA8491463.1_6273
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000864.1_cds_GFH15535.1_10012 HaLaN_11776, GFH15535 Ubiquitin-like domain-containing protein 0.02 OrthoFinder
lcl|BLLF01005933.1_cds_GFH31773.1_26250 HaLaN_30884, GFH31773 Ubiquitin-like domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008193 tRNA guanylyltransferase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR027799 Rtf2_RING-finger 1 245
No external refs found!