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  5. Cpa|evm.model.tig00000215.17

Cpa|evm.model.tig00000215.17 (tig00000215_g18546.t1)


Aliases : tig00000215_g18546.t1

Description : Solute transport.channels.VCCN chloride anion channel


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000215.17
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Dusal.0164s00019.1 33198390 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Dusal.0316s00005.1 33189593 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
EOD05573 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
EOD07973 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
EOD20640 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
PTI_05G03790.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
PTI_10G00030.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
TP04G07790.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_62602 62602 Hypothetical protein 0.01 OrthoFinder
Vocar.0002s0649.1 32890687 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Vocar.0007s0386.1 32887862 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW33911.1_2861 PRW33911 Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33245.1_3628 PRW33245 UPF0187 chloroplastic 0.02 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32665.1_4091 PRW32665 UPF0187 chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0005891 voltage-gated calcium channel complex IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0034703 cation channel complex IEP Enrichment
CC GO:0034704 calcium channel complex IEP Enrichment
CC GO:0036128 CatSper complex IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 9 185
No external refs found!