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  5. lcl|VRMN01000013.1_cds_KAA8491437.1_6247

lcl|VRMN01000013.1_cds_KAA8491437.1_6247 (KAA8491437)


Aliases : KAA8491437

Description : Thioredoxin-like 2, chloroplastic


Gene families : OG_01_0000032 (OrthoFinder) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000013.1_cds_KAA8491437.1_6247
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cz08g00220.t1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
PTI_18G00650.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000360.1_cds_GFH10937.1_5414 HaLaN_06343, GFH10937 Thioredoxin domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000641.1_cds_GFH13688.1_8165 HaLaN_09622, GFH13688 Thioredoxin domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 92 173
No external refs found!