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  5. lcl|VRMN01000013.1_cds_KAA8491420.1_6230

lcl|VRMN01000013.1_cds_KAA8491420.1_6230 (KAA8491420)


Aliases : KAA8491420

Description : Hypothetical protein


Gene families : OG_01_0002363 (OrthoFinder) Phylogenetic Tree(s): OG0002363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000013.1_cds_KAA8491420.1_6230
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000011.1_cds_KAA8492024.1_5032 KAA8492024 Transposon Ty2-B Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491414.1_6224 KAA8491414 Transposon Ty2-B Gag-Pol polyprotein 0.07 OrthoFinder
lcl|VRMN01000028.1_cds_KAA8490414.1_5037 KAA8490414 Hypothetical protein 0.18 OrthoFinder
lcl|VRMN01000028.1_cds_KAA8490425.1_5048 KAA8490425 Transposon Ty2-B Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000035.1_cds_KAA8490294.1_6215 KAA8490294 Transposon Ty2-B Gag-Pol polyprotein 0.05 OrthoFinder
lcl|VRMN01000035.1_cds_KAA8490299.1_6220 KAA8490299 Hypothetical protein 0.18 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0032196 transposition IEP Enrichment

No InterPro domains available for this sequence

No external refs found!