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  5. lcl|VRMN01000012.1_cds_KAA8491669.1_5137

lcl|VRMN01000012.1_cds_KAA8491669.1_5137 (KAA8491669)


Aliases : KAA8491669

Description : Ultraviolet-B receptor UVR8


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000012.1_cds_KAA8491669.1_5137
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021318.63 tig00021318_g20183.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.0004s00027.1 33201009 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
Vocar.0015s0114.1 32899122 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.01 OrthoFinder
XM_002501718.1 MICPUN_57855, 57855 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 258 307
IPR000408 Reg_chr_condens 366 421
IPR000408 Reg_chr_condens 98 145
IPR000408 Reg_chr_condens 148 207
IPR000408 Reg_chr_condens 311 361
IPR000408 Reg_chr_condens 423 477
No external refs found!