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  5. lcl|VRMN01000012.1_cds_KAA8491603.1_5071

lcl|VRMN01000012.1_cds_KAA8491603.1_5071 (KAA8491603)


Aliases : KAA8491603

Description : Zinc finger, CCHC-type [Interproscan].


Gene families : OG_01_0005627 (OrthoFinder) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000012.1_cds_KAA8491603.1_5071
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000002.1_cds_KAA8497382.1_1111 KAA8497382 Zinc finger, CCHC-type [Interproscan]. 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495818.1_1816 KAA8495818 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 345 360
No external refs found!