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  5. lcl|VRMN01000011.1_cds_KAA8492024.1_5032

lcl|VRMN01000011.1_cds_KAA8492024.1_5032 (KAA8492024)


Aliases : KAA8492024

Description : Transposon Ty2-B Gag-Pol polyprotein


Gene families : OG_01_0002363 (OrthoFinder) Phylogenetic Tree(s): OG0002363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000011.1_cds_KAA8492024.1_5032

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000005.1_cds_KAA8494233.1_4097 KAA8494233 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494234.1_4098 KAA8494234 Hypothetical protein 0.11 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491414.1_6224 KAA8491414 Transposon Ty2-B Gag-Pol polyprotein 0.1 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491420.1_6230 KAA8491420 Hypothetical protein 0.05 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491150.1_5778 KAA8491150 Hypothetical protein 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 2181 2388
No external refs found!