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  5. lcl|VRMN01000011.1_cds_KAA8492008.1_5016

lcl|VRMN01000011.1_cds_KAA8492008.1_5016 (KAA8492008)


Aliases : KAA8492008

Description : ATP-dependent Clp protease proteolytic subunit 1


Gene families : OG_01_0000040 (OrthoFinder) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000011.1_cds_KAA8492008.1_5016
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001420.2 tig00001420_g8689.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00020553.201 tig00020553_g10691.t1 ATP-dependent Clp protease proteolytic subunit 4,... 0.02 OrthoFinder
Cpa|evm.model.tig00020952.49 tig00020952_g16507.t1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder
Cz01g02300.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz12g19140.t1 No alias Clp protease proteolytic subunit... 0.03 OrthoFinder
Cz19g05120.t1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Dusal.0235s00001.1 33189619 Clp protease proteolytic subunit... 0.02 OrthoFinder
EOD13717 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
EOD35346 No alias Putative endopeptidase Clp [Ensembl]. 0.02 OrthoFinder
OT_05G01890.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_04G01800.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_15G00750.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
PTI_26G01270.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
SymbC1.scaffold135.8 135.8 Clp protease proteolytic subunit... 0.02 OrthoFinder
TP14G01640.1 No alias Clp protease proteolytic subunit... 0.02 OrthoFinder
Transcript_contig_53937 53937 Clp protease proteolytic subunit... 0.03 OrthoFinder
Transcript_contig_56182 56182 Clp protease proteolytic subunit... 0.01 OrthoFinder
lcl|BLLF01003486.1_cds_GFH27470.1_21947 HaLaN_25795, GFH27470 ATP-dependent Clp protease, protease subunit 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61527.1_10 PRW61527 ATP-dependent Clp protease proteolytic subunit chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 76 253
No external refs found!