lcl|VRMN01000011.1_cds_KAA8491936.1_4944 (KAA8491936)

Aliases : KAA8491936

Description : TRNA pseudouridine synthase B

Gene families : OG_01_0000746 (OrthoFinder) Phylogenetic Tree(s): OG0000746_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000011.1_cds_KAA8491936.1_4944
Cluster	HCCA: Cluster_58

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005484	SNAP receptor activity	IEP	Enrichment
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Enrichment
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Enrichment
MF	GO:0008531	riboflavin kinase activity	IEP	Enrichment
CC	GO:0017119	Golgi transport complex	IEP	Enrichment
MF	GO:0019211	phosphatase activator activity	IEP	Enrichment
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
MF	GO:0060090	molecular adaptor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002501	PsdUridine_synth_N	171	309
IPR032819	TruB_C	312	343

External Links

No external refs found!