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  5. lcl|VRMN01000011.1_cds_KAA8491933.1_4941

lcl|VRMN01000011.1_cds_KAA8491933.1_4941 (KAA8491933)


Aliases : KAA8491933

Description : TRNA pseudouridine synthase B


Gene families : OG_01_0000746 (OrthoFinder) Phylogenetic Tree(s): OG0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000011.1_cds_KAA8491933.1_4941
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021428.25 tig00021428_g21169.t1 No description available 0.01 OrthoFinder
SymbC1.scaffold21125.1 21125.1 Pseudouridine synthase II, N-terminal;... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009611 response to wounding IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 144 290
No external refs found!