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  5. lcl|VRMN01000011.1_cds_KAA8491834.1_4842

lcl|VRMN01000011.1_cds_KAA8491834.1_4842 (KAA8491834)


Aliases : KAA8491834

Description : Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle


Gene families : OG_01_0001581 (OrthoFinder) Phylogenetic Tree(s): OG0001581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000011.1_cds_KAA8491834.1_4842
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000970.19 tig00000970_g5838.t1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder
Cre11.g467689 30775730, PETC Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder
Cz13g12160.t1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.04 OrthoFinder
OT_01G06660.1 No alias Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.04 OrthoFinder
PTI_11G00460.1 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.04 OrthoFinder
Sro565_g167640.1 Contig2465.g20189 F complex iron-sulfur subunit 0.01 OrthoFinder
TP02G07910.1 No alias Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.02 OrthoFinder
Transcript_contig_78467 78467 Cytochrome B6-F complex Fe-S subunit; Rieske [2Fe-2S]... 0.02 OrthoFinder
Vocar.0009s0349.1 32893192 Rieske [2Fe-2S] iron-sulphur domain; Cytochrome B6-F... 0.03 OrthoFinder
XM_002506874.1 MICPUN_88922, 88922 Cytochrome b6/f complex iron-sulfur subunit, chloroplast... 0.02 OrthoFinder
XM_003063058.1 MicpuC2_36185, 36185 Cytochrome b6/f complex iron-sulfur subunit, chloroplast... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 119 176
No external refs found!