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  5. lcl|VRMN01000010.1_cds_KAA8492267.1_5450

lcl|VRMN01000010.1_cds_KAA8492267.1_5450 (KAA8492267)


Aliases : KAA8492267

Description : WD and tetratricopeptide repeats protein 1


Gene families : OG_01_0000813 (OrthoFinder) Phylogenetic Tree(s): OG0000813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492267.1_5450
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.87 tig00020610_g12034.t1 No description available 0.03 OrthoFinder
OT_13G01660.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
PTI_15G00680.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 44 78
No external refs found!