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  5. lcl|VRMN01000010.1_cds_KAA8492240.1_5423

lcl|VRMN01000010.1_cds_KAA8492240.1_5423 (KAA8492240)


Aliases : KAA8492240

Description : Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic


Gene families : OG_01_0001801 (OrthoFinder) Phylogenetic Tree(s): OG0001801_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492240.1_5423
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Sro2286_g322020.1 Contig20.g154 Pentafunctional AROM polypeptide 0.02 OrthoFinder
Transcript_contig_56202 56202 3-dehydroquinate dehydratase type I; Shikimate... 0.02 OrthoFinder
XM_002507520.1 MICPUN_89537, 89537 Dehydroquinate dehydratase 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59017.1_7158 PRW59017 Dehydroquinate dehydratase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 366 414
IPR013708 Shikimate_DH-bd_N 249 334
IPR001381 DHquinase_I 7 235
No external refs found!