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  5. lcl|VRMN01000010.1_cds_KAA8492234.1_5417

lcl|VRMN01000010.1_cds_KAA8492234.1_5417 (KAA8492234)


Aliases : KAA8492234

Description : Protein farnesyltransferase subunit beta


Gene families : OG_01_0000594 (OrthoFinder) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492234.1_5417
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
PTI_12G03910.1 No alias PFTB repeat [Interproscan]. 0.01 OrthoFinder
Sro281_g107200.1 Contig3786.g29059 Transferase type-1 subunit beta 0.01 OrthoFinder
XM_003056954.1 MicpuC2_2945, 2945 PFTB repeat [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59450.1_6822 PRW59450 Farnesyltransferase subunit beta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004576 oligosaccharyl transferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
BP GO:0018196 peptidyl-asparagine modification IEP Enrichment
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045048 protein insertion into ER membrane IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051205 protein insertion into membrane IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 209 252
IPR001330 PFTB_repeat 330 357
IPR001330 PFTB_repeat 374 403
IPR001330 PFTB_repeat 265 301
IPR001330 PFTB_repeat 176 201
No external refs found!