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  5. lcl|VRMN01000010.1_cds_KAA8492200.1_5383

lcl|VRMN01000010.1_cds_KAA8492200.1_5383 (KAA8492200)


Aliases : KAA8492200

Description : 26S proteasome regulatory subunit 4-like B


Gene families : OG_01_0002743 (OrthoFinder) Phylogenetic Tree(s): OG0002743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492200.1_5383
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001042.6 tig00001042_g6583.t1 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder
Cre07.g329700 30774542, RPT2 Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder
Dusal.0208s00022.1 33194129 Diaminopimelate epimerase, DapF; ATPase, AAA-type, core;... 0.02 OrthoFinder
PTI_03G00970.1 No alias Proteasomal ATPase OB C-terminal domain; AAA ATPase,... 0.03 OrthoFinder
Sro35_g022630.1 Contig3323.g26140 26S proteasome regulatory subunit 4 0.05 OrthoFinder
TP01G06520.1 No alias Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
Transcript_contig_56893 56893 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.02 OrthoFinder
Vocar.0017s0200.1 32891504 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.04 OrthoFinder
XM_003062509.1 MicpuC2_49715, 49715 Proteasomal ATPase OB C-terminal domain; ATPase,... 0.01 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57564.1_8566 PRW57564 26S proteasome regulatory subunit 4-like protein B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 372 416
IPR003959 ATPase_AAA_core 217 350
IPR032501 Prot_ATP_ID_OB 104 155
No external refs found!