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  5. lcl|VRMN01000010.1_cds_KAA8492115.1_5298

lcl|VRMN01000010.1_cds_KAA8492115.1_5298 (KAA8492115)


Aliases : KAA8492115

Description : E3 ubiquitin-protein ligase SDIR1


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492115.1_5298
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.59 tig00000792_g4210.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
PTI_09G00300.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro117_g057280.1 Contig3937.g30172 Protein ligase Arkadia 0.02 OrthoFinder
Sro239_g096030.1 Contig3063.g24399 Protein ligase RNF181 0.02 OrthoFinder
SymbC1.scaffold449.5 449.5 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0216.1 32894307 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Vocar.0009s0104.1 32893138 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001186.1_cds_GFH17690.1_12167 HaLaN_14375, GFH17690 E3 ubiquitin-protein ligase AIP2 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495830.1_1828 KAA8495830 Putative E3 ubiquitin-protein ligase RHC1A 0.04 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490863.1_5635 KAA8490863 E3 ubiquitin-protein ligase SDIR1 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 396 437
No external refs found!