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  5. lcl|VRMN01000010.1_cds_KAA8492110.1_5293

lcl|VRMN01000010.1_cds_KAA8492110.1_5293 (KAA8492110)


Aliases : KAA8492110

Description : Hypothetical protein


Gene families : OG_01_0002023 (OrthoFinder) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492110.1_5293
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000001.1_cds_KAA8497669.1_6622 KAA8497669 Integrase, catalytic core; gag-polyprotein putative... 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499406.1_8359 KAA8499406 Gag-Pol polyprotein 0.19 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499408.1_8361 KAA8499408 Retrotransposon gag domain; Zinc finger, CCHC-type... 0.07 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497003.1_732 KAA8497003 Copia protein 0.18 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497005.1_734 KAA8497005 Integrase, catalytic core; gag-polyprotein putative... 0.14 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494832.1_3362 KAA8494832 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.1 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494833.1_3363 KAA8494833 Retrotransposon gag domain; Zinc finger, CCHC-type... 0.07 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494875.1_3405 KAA8494875 Hypothetical protein 0.04 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494877.1_3407 KAA8494877 Retrovirus-related Pol polyprotein from transposon TNT 1-94 0.13 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494878.1_3408 KAA8494878 Retrotransposon gag domain; Zinc finger, CCHC-type... 0.07 OrthoFinder
lcl|VRMN01000014.1_cds_KAA8491359.1_2360 KAA8491359 Copia protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!