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  5. lcl|VRMN01000010.1_cds_KAA8492080.1_5263

lcl|VRMN01000010.1_cds_KAA8492080.1_5263 (KAA8492080)


Aliases : KAA8492080

Description : Vegetative incompatibility protein HET-E-1


Gene families : OG_01_0001864 (OrthoFinder) Phylogenetic Tree(s): OG0001864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000010.1_cds_KAA8492080.1_5263
Cluster HCCA: Cluster_42


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0000959 mitochondrial RNA metabolic process IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
CC GO:0070461 SAGA-type complex IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 46 81
IPR001680 WD40_repeat 6 39
IPR001680 WD40_repeat 211 249
IPR001680 WD40_repeat 127 165
IPR001680 WD40_repeat 253 291
IPR001680 WD40_repeat 85 123
IPR001680 WD40_repeat 169 207
No external refs found!